Go here and check out what they have.
It's probably why the false bottoms were knocked out. You can put a media basket and fuge in chamber 2 or you can do a media basket and a skimmer in chamber 2. Most will say you don't need a skimmer in a 29 gallon IF your religious with your weekly water changes. I have the Tunze9002 an do 5 gallon water changes every Friday and I honestly think running a skimmer is a waste (at least for me as I have yet to empty the cup)
I think inTank is a good place to start! You can run your purigen, filter floss and chemi pure elite in the basket and if you go the fuge route you can add cheato and seed the fuge with copepods. Your gonna did a fuge light also if you go that route, you can do a submersible light or one that goes on the outside and will shine through the window in the back. jbj make a fuge light and so does Coralife. You can also use a utility light with a deflector. The options are there it's all about budget and how far you wanna go.
As far as lights go. I found the stock lights to be junk for what I wanted to keep. Clams, sps
, and other high light corals.
Now flow... If it came with the stock pump IMO
I would upgrade with the MJ1200, the inTank site has it, it's just under a new name. It's worth the money your gonna want more flow.
I have the MJ1200 and a MP10 on my cube.
I also gutted the stock hood and installed the AI SOL BLUE LED
This should get your wheels spinning lol and bring about more questions.
Oh and you don't need the MP10 I was saying what I use. I use to have 2 Koralia 425's but in a small tank heat becomes an issue so I took them out. The MP10 is unique as the dry side is the motor so it doesn't go in the tank and won't create heat. The Koralia's are in the water motor and all.