It's always a good idea to do that before a blackout, as it limits the food that the algae might be able to store/use even without light. That being said if you did a large PWC before starting you reduced the amount by 1/2, and it would be tough to imagine if your tank is covered well that any algae will survive 5 days without light.
Now my 3 day blackout, I wanted to make sure there was no excess nutrients present since its possible that something could hang on that long (lets hope not.
The BBA is really the only offensive looking algae in the tank, the brush algae is just a pain to deal with. I'm hoping that the addition of Excel (only been dosing for a week), with a more strict CO2 monitoring, and lower light (now am using a 50/50 65w on my 20gallon rather than the previous 6700k) will make these problems disappear for good.