Hmmmm, that's not right. Even if the filter pad is full of crud, the water in my tanks still flows properly. Try unplugging the filter and take out the pad and see if gunk is in the fliter itself.water is still flowing back down intake valve.
You can take the new filter pad and rub it against the new one, this will tranfer some bacteria. However, I would not change out the pad since the tank is not finished with the cycle."Squueze bacteria from old filter" What do you mean?