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I didn't.. I was more worried about my emerald crabs and snails.. I took about Half the rock out and put in a tub with some water from the tank and carefully rearranged from there, double checking that no one was getting squished. The chromis were a little freaked out and were hiding for a while but everyone else seemed fine.
Thanks for the compliments everyone! I am a lot happier with and wish I had done it sooner.. When I got my base rock a few months ago I just starter piling it in and the obviously didn't turn out good.