Brackish water fish include Scats (my personal favorties), Monos (another favorite), Pufferfish, Archer Fish, many Gobies, White Tip Shark Cats, Platinum Barbs, Blue Panchax (a pretty fish), and Ricefish.
As for mollies not doing well in brackish tanks, that is the first time I've heard that. Mollies have been known to naturally occur in brackish waters, albeit sparsely. In the areas they inhabit in the wild they may often encounter brackish conditions. They should be able to handle the osmotic pressures involved.
Other freshwater fish like this are other livebearers such as swordfish and platies. I've kept all these fish in brackish tanks for years with no ill effect. They have even bred in them!
About the filter, if you are concerned about a strong flow into the tank, you can always redirect the flow along the surface of the water. This has the added benefit of breaking the surface tension of the water more, thereby improving your water oxygenation.